Phylogenetics and dating with
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The bats (Chiroptera) are one such group where many phylogenetic studies have focused either on understanding higher-level bat relationships (e.g.
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A time-calibrated species-level phylogeny of bats (Chiroptera, Mammalia). The exceptions are in most cases apparently due to the misplacement of species with little available data, while in a few cases the results suggest putative problems with current classification, such as the non-monophyly of Mormoopidae.
However, our results only weakly reject the former and strongly support the latter group, and furthermore, a time calibrated analysis of a pruned dataset where most included taxa have the entire 1140bp cytb sequence finds monophyletic Yinpterochiroptera.
As outgroups we selected 10 species representing other Pegasoferae : Cetartidoactyla, Perissodactyla, Carnivora, Pholidota (pangolins), and Erinaceomorpha as the primary outgroup.
Because many of the taxa have incomplete Cytb sequences, and missing data can cause problems in phylogenetic reconstruction (e.g.
In the meantime, species level phylogenies may be rapidly reconstructed with already available data using several approaches.